This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
capri:get-capri [2018/12/19 10:26] – [STAR - Stable Releases of CAPRI] torbjornj | capri:get-capri [2020/04/30 09:19] – [Public releases of code and input data] Simplified table of download links. torbjornj | ||
---|---|---|---|
Line 3: | Line 3: | ||
Starting 2016, the CAPRI model shall be made more accessible to the scientific community by the provision of supported stable releases, a.k.a. Stars. The first Star was published at the end of November 2016. The idea behind the Star is to provide a well tested version of the model, that does not change over time save, and where maintenance releases address critical issues. The [[capri: | Starting 2016, the CAPRI model shall be made more accessible to the scientific community by the provision of supported stable releases, a.k.a. Stars. The first Star was published at the end of November 2016. The idea behind the Star is to provide a well tested version of the model, that does not change over time save, and where maintenance releases address critical issues. The [[capri: | ||
- | ===== How to obtain | + | ===== How to obtain |
- | ==== Model code: For users without | + | The model consists of (a) the model code including raw data and (b) the compiled data base including calibrated baselines. The model is really self contained in (a), since all software and raw data needed |
- | From release 2.0 we decided to make all releases of CAPRI publicly available without going through | + | |
- | [[https:// | + | ===== Download the current release ===== |
+ | From 2016, the CAPRI model was made more accessible to the scientific community by the provision of supported stable releases. The stable releases are tagged and “frozen” versions of the model that can be referenced to and that will not change. The bug fixes and other code updates result in new releases with updated revision numbers. The release versions have been subjected to extensive testing, ensuring that all supported features technically work under different hardware/ | ||
- | [[https:// | + | The stable release consists of (a) the model code including raw data and (b) the compiled data base including calibrated baselines. The model is really self contained in (a), since all software and raw data needed to compile the data bases and construct the baselines is found there. Albeit (b), the databases, can be derived from (a), doing so is a somewhat complicated process. Therefore, we provide (b) as a shortcut. Furthermore, |
+ | The current release and selected previous releases can be downloaded as compressed (zipped) archives using the links in the following table. Note that the item " | ||
- | [[https:// | + | ^ Release |
+ | | STAR 2.5 | Code | [[https:// | ||
+ | | ::: | ||
+ | | ::: | ||
+ | | STAR 2.4 | Code | [[https:// | ||
+ | | ::: | ||
+ | | ::: | ||
+ | | STAR 1.4 | Code | [[https:// | ||
+ | | ::: | ||
+ | | ::: | ||
+ | ==== Code and inputs for registered users of the CAPRI SVN system ==== | ||
+ | CAPRI developers with an account in the CAPRI SVN system can also access the releases using their SVN client and regular credentials. The following links point to each release: | ||
- | [[https:// | ||
- | |||
- | |||
- | [[https:// | ||
- | |||
- | |||
- | [[https:// | ||
- | |||
- | |||
- | [[https:// | ||
- | |||
- | |||
- | [[https:// | ||
- | |||
- | |||
- | [[https:// | ||
- | |||
- | |||
- | ==== Model code: For registered users of the CAPRI SVN system ==== | ||
- | Users that have participated in the CAPRI training courses will have access to the code base and the model via the Subversion Numbering system (SVN), and the instructions here do not apply to such users. They should point their SVN client to the tags " | ||
- | |||
- | Please refer to the [[capri: | ||
^ Version | ^ Version | ||
+ | | STAR 2.4 | https:// | ||
| STAR 2.3 | https:// | | STAR 2.3 | https:// | ||
| STAR 2.2 | https:// | | STAR 2.2 | https:// | ||
Line 52: | Line 43: | ||
- | ==== Databases ==== | + | ==== Part B: Databases ==== |
+ | |||
+ | The model code contains all raw data and routines for building the CAPRI data sets needed to run the system. However, doing so can be tedious, technical and error prone. Here, we therefore provide a standard data base for selected releases. Please extract the contents of the zipped files into the *results* directory of your model installation (by default .\output\results). Use the data base with the same release number as the model code. Novel in STAR 2.4 is that we put an html file in the root of the results folder (batch.html), | ||
- | The model code contains all raw data and routines for building | + | **Note: |
- | Data bases for selected releases, doing away with the need to build all databases if extracted into the *results* directory of your model installation. | + | [[https:// |
[[https:// | [[https:// | ||
Line 80: | Line 73: | ||
- In the first tab: enter your name | - In the first tab: enter your name | ||
- In the second tab: verify that the paths to result and restart folders are set to **..\output\results** and **..\output\restart**. The GAMS directory should read **..\gams** and the data directory should read **..\dat**. | - In the second tab: verify that the paths to result and restart folders are set to **..\output\results** and **..\output\restart**. The GAMS directory should read **..\gams** and the data directory should read **..\dat**. | ||
- | - In the third tab: enter the complete path to the GAMS executable. Probably it is **c: | + | - In the third tab: enter the complete path to the GAMS executable. Probably it is something like **c: |
- In the fourth tab: do nothing. | - In the fourth tab: do nothing. | ||
- In the final tab: do nothing. | - In the final tab: do nothing. | ||
Line 87: | Line 80: | ||
===== Build databases and baselines ===== | ===== Build databases and baselines ===== | ||
- | Now you need to build all databases | + | If you do not use one of the data bases provided above, or for some other reason want to build all databases |
- In the GUI, choose the workstep " | - In the GUI, choose the workstep " |